Re: [AMBER] how to create nice animated videos to show simulations

From: Carlos Simmerling <>
Date: Wed, 1 Jul 2020 06:40:47 -0400

You will probably get more help on the VMD email list, or looking at their
tutorials. A good start is to learn the rmsd trajectory tool that will keep
your peptide centered. You can also do that using cpptraj in Amber, but for
videos it might just be easier to do it all in VMD.

On Wed, Jul 1, 2020, 6:31 AM Chetna Tyagi <> wrote:

> Dear all,
> Can anyone direct me how to create nice animation videos for my
> simulations?
> Using VMD I can not control many aspects of how the final video will look
> like.
> The peptide moves in every direction (in the solvent box) and it is not
> good to be used in a presentation.
> Is it possible to keep the peptide static, fixed to one point while the
> structural changes can be observed smoothly.
> Like in this example, the view
> of the peptides remains static and fixed.
> Any help or ideas are appreciated and much needed.
> --
> Best wishes
> Chetna
> _______________________________________________
> AMBER mailing list
AMBER mailing list
Received on Wed Jul 01 2020 - 04:00:06 PDT
Custom Search