Dear Sir,
Thanks for your kind reply.
1. I carried out DOCKPREP for the ligand in Chimera (adds hydrogen, charge)
2. I did not find any specific errors in *sqm.out* file
3. Didn't find the solution in the mailing list
I also attached the *sqm.out* file. Plese kindly help me to fix the error
in antechamber
Error:
Running: /apps/chpc/chem/amber/14/bin/sqm -O -i sqm.in -o sqm.out
Error: cannot run "/apps/chpc/chem/amber/14/bin/sqm -O -i sqm.in -o
sqm.out" of bcc() in charge.c properly, exit
*Thanks & Regards*
*Ramesh M*
Email: shreeramesh.gmail.com
On Sat, Jun 27, 2020 at 1:34 AM Scott Brozell <sbrozell.iqb.rutgers.edu>
wrote:
> Hi,
>
> On Fri, Jun 26, 2020 at 08:08:55PM +0530, Shreeramesh wrote:
> > When I run Antechamber for the ligand, I am getting the following error.
> I
> > have attached the input file of my ligand in the attachment. I request
> you
> > to kindly help to fix this error.
> >
> > Error:
> > Error: cannot run "/apps/chpc/chem/amber/14/bin/sqm -O -i sqm.in -o
> > sqm.out" of bcc() in charge.c properly, exit
>
> What have you done to investigate the problem ?
> In particular, what did you learn from examining sqm.out ?
> And what did you find when you searched the mailing list archives ?
>
> scott
>
>
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- application/octet-stream attachment: sqm.out
Received on Sat Jun 27 2020 - 05:30:03 PDT
