Re: [AMBER] Hoogsteen H-bond

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Wed, 24 Jun 2020 08:20:41 -0400

Hi,

It would help us diagnose your issue if you posted the exact input you
were trying. Also what version of cpptraj you are using.

-Dan

On Sat, Jun 20, 2020 at 1:21 AM Jisha B <jisha.b.k0511.gmail.com> wrote:
>
> Dear all,
>
> Is there a specific input to find the hoogsteen hydrogen bond percentages
> in the system? Or should we use the common hydrogen bond input. I have been
> getting a bizzare result while doing so. The percentage of bonds starts
> from 99 and gradually decreases to 20% in the output when I use the normal
> h-bond input. I suspect that my input is wrong.
> Please advise. Any help would be appreciated.
>
> Thanks
> Jisha
>
> --
> Jisha B.
> G-Tech Computer Education,
> Kerala,
> India.
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Received on Wed Jun 24 2020 - 05:30:06 PDT
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