Re: [AMBER] Fwd: Error: Could not determine format of topology

From: David A Case <>
Date: Wed, 17 Jun 2020 15:12:16 -0400

On Wed, Jun 17, 2020, Jag Silwal wrote:
>ambpdb -p act2-crd.txt -c act2-top.txt > jpt.pdb

 From the file names, it looks like you have things backwards: you appear
to be giving the coordinates (act2-crd.txt) with the "-p" flag and
the topology (act2-top.txt) with the "-c" flag.

Try swapping the file names.


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Received on Wed Jun 17 2020 - 12:30:03 PDT
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