Re: [AMBER] how to combine several stripped trajectory netcdf files

From: Nada Afiva <nadaafiva.gmail.com>
Date: Wed, 17 Jun 2020 11:03:04 +0700

Thanks so much Sir.

Best regards,
nadaafiva

Pada tanggal Rab, 17 Jun 2020 pukul 11.02 Elvis Martis <
elvis_bcp.elvismartis.in> menulis:

> Yes that is correct, just replace xnz with a name you want your trajectory
> to be named as.
> Best Regards
> Elvis
>
>
>
> On Wed, 17 Jun 2020 at 09:15, Nada Afiva <nadaafiva.gmail.com> wrote:
>
> > Thanks so much sir,
> > Is the "trajout xnz.nc" the output file?
> > Thank you.
> >
> >
> > Pada tanggal Rab, 17 Jun 2020 pukul 10.39 Elvis Martis <
> > elvis_bcp.elvismartis.in> menulis:
> >
> > > Hi
> > > Load all the stripped trajectories (trajin command) in cpptraj and by
> > > "trajout xyz.nc" you should be able to get a concatenated trajectory.
> > >
> > > Best Regards
> > > Elvis
> > >
> > >
> > >
> > > On Wed, 17 Jun 2020 at 08:42, Nada Afiva <nadaafiva.gmail.com> wrote:
> > >
> > > > Dear Amber users,
> > > > I have run 40 ns simulation and stripped trajectory files in 4
> > different
> > > > files:
> > > > 1. production 0-10 ns: 1 stripped trajectory file
> > > > 2. production 11-20: 1 stripped trajectory file
> > > > 3. production 21-30: 1 stripped trajectory file
> > > > 4. production 31-40: 1 stripped trajectory file
> > > > So I have 4 stripped trajectory files and I want to combine the four
> > > > stripped trajectory files in one file.
> > > > How to do that.
> > > > thank you in advance.
> > > >
> > > > best,
> > > > Nadaafiva
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Received on Tue Jun 16 2020 - 21:30:04 PDT
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