Thanks Dave.
Our default python environment is 3.7.
Running python2.7 from miniconda resolved the pytraj error.
Ravi
On Mon, Apr 20, 2020 at 5:06 AM David A Case <david.case.rutgers.edu> wrote:
> On Mon, Apr 20, 2020, Ravi Abrol wrote:
> >
> >We are trying to run pytraj and getting the following error:
>
> What version of python are you using here?
>
> >Is this due to python2.7 lib folder in amber18 being incompatible with
> >python3 environment
>
> That is my first guess.
>
> >
> >A related question is, what is the currently recommended way to
> install/run
> >pytraj from AmberTools19?
>
> Say "yes" when prompted to download miniconda, which defaults to version
> 2. Use that python (which will be in $AMBERHOME/miniconda/bin) to run
> pytraj. The miniconda inside the $AMBERHOME folder won't interfere with
> your system python.
>
> ....dac
>
>
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Received on Mon Apr 20 2020 - 14:30:02 PDT
