[AMBER] reinstalling Amber 16 + Ambertools 16 on a Mac

From: erik zuiderweg <erikzuiderweg.gmail.com>
Date: Mon, 30 Dec 2019 12:38:59 +0100

Hello there,

I am running into trouble (re) installing Amber16 on a iMac running OS 10.13.6 (High Sierra), using Xcode 10.1.
I am starting from Amber16.tar.bz2 and AmberTools16.tar.bz2.

The ./configure gnu completes without errors.

Then, the make install script runs quite OK, until:

aits<char>, std::__1::allocator<char> > in libemil.a(setup.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[2]: *** [/Users/erpz/AMBER_DIR/amber16/bin/sander] Error 1
make[1]: *** [serial] Error 2
make: *** [install] Error 2

I really do not want to change to OS 10.14, because that messes up all of the library and compiler locations, that I use for my own source code development.

Anyone out there who can help?

Erik R.P. Zuiderweg
Professor Emeritus
Department of Biological Chemistry
University of Michigan Medical School
Ann Arbor, MI, USA
Guest Professor, Institute for Molecules and Materials,
Radboud University, Nijmegen,
The Netherlands
Director, EZ-NMR consulting
zuiderwe.umich.edu <mailto:zuiderwe.umich.edu> ; eznmrlab.gmail.com <mailto:eznmrlab.gmail.com>
(+31) 611154835

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Received on Mon Dec 30 2019 - 04:00:02 PST
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