yes, I applied that before I compiling it. But the problem is still there.
On 12/13/2019 02:46 AM, Gerald Monard wrote:
> Hello,
>
> Did you applied the solution described at
> http://ambermd.org/Installation.php for OpenSuse?
>
> Gerald.
>
> On 12/12/19 01:21, Albert wrote:
>
>> Hello,
>>
>> I am trying to compile Amber18+AmberTool19 in my opensuse 15.1 x64 OS
>> with command line:
>>
>> ./configure gnu
>>
>> but it always failed with the following messages:
>>
>> I am using gcc-8
>>
>> ----------------------------
>>
>> cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for
>> C/ObjC but not for C++
>> cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for
>> C/ObjC but not for C++
>> src/readparm.cpp: In function ‘ExitStatus readparm(const string&,
>> std::vector<std::__cxx11::basic_string<char> >&, ParmDataMap&,
>> ParmStringMap&, ParmStringMap&, ParmFormatMap&, std::__cxx11::string&)’:
>> src/readparm.cpp:143:28: warning: ‘char* strncpy(char*, const char*,
>> size_t)’ specified bound 8 equals destination size [-Wstringop-truncation]
>> strncpy(d.c, word.c_str(), MAX_HOLLERITH_SIZE);
>> ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>> /soft/amber/18/miniconda/compiler_compat/ld:
>> /usr/lib64/gcc/x86_64-suse-linux/8/../../../../lib64/crti.o: unable to
>> initialize decompress status for section .debug_aranges
>> /soft/amber/18/miniconda/compiler_compat/ld:
>> /usr/lib64/gcc/x86_64-suse-linux/8/../../../../lib64/crti.o: unable to
>> initialize decompress status for section .debug_aranges
>> /soft/amber/18/miniconda/compiler_compat/ld:
>> /usr/lib64/gcc/x86_64-suse-linux/8/../../../../lib64/crti.o: unable to
>> initialize decompress status for section .debug_aranges
>> /soft/amber/18/miniconda/compiler_compat/ld:
>> /usr/lib64/gcc/x86_64-suse-linux/8/../../../../lib64/crti.o: unable to
>> initialize decompress status for section .debug_aranges
>> /usr/lib64/gcc/x86_64-suse-linux/8/../../../../lib64/crti.o: file not
>> recognized: file format not recognized
>> collect2: error: ld returned 1 exit status
>> error: command 'g++' failed with exit status 1
>> make[2]: *** [Makefile:525: parmed] Error 1
>> make[2]: Leaving directory '/soft/amber/18/AmberTools/src'
>> make[1]: *** [Makefile:56: serial] Error 2
>> make[1]: Leaving directory '/soft/amber/18/AmberTools/src'
>> make: *** [Makefile:7: install] Error 2
>> ------------------------------------------------
>>
>>
>> Thank you very much
>>
>> Albert
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
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Received on Thu Dec 12 2019 - 17:00:02 PST
