I have a collection of atoms which forms a helical structure. I need to
find the vector corresponding to the axis of this helix, since I will be
using that as a collective variable in an umbrella sampling simulation. Can
someone please suggest me a way around?
A follow up question: How can i get angle between two vectors in amber as a
collective variable?
Thanks in advance.
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Received on Thu Dec 20 2018 - 09:30:04 PST
