Dear Sir/Madam:
I have installed the serial version of Amber18 successfully using clang.
I would need to compile parallel (MPI), so I ran ./configure -mpi clang.
I got several error messages:
mpif90 -DBINTRAJ -DEMIL -DMPI -o numprocs numprocs.F90
mpif-sizeof.h:66:41:
Error: Array specification at (1) has more than 7 dimensions
mpif-sizeof.h:72:41:
…
Error: Ambiguous interfaces in generic interface 'pmpi_sizeof' for ‘pmpi_sizeof_real64_r14’ at (1) and ‘pmpi_sizeof_real64_r15’ at (2)
make[2]: *** [parallel] Error 1
make[1]: *** [parallel] Error 2
make: *** [install] Error 2
Could someone give me some hints on how to solve this?
Thanks
Pedro
Some info on my Open MPI:
Package: Open MPI brew.HighSierra-2.local Distribution
Open MPI: 3.1.3
Open MPI repo revision: v3.1.3
Open MPI release date: Oct 29, 2018
Open RTE: 3.1.3
Open RTE repo revision: v3.1.3
Open RTE release date: Oct 29, 2018
OPAL: 3.1.3
OPAL repo revision: v3.1.3
OPAL release date: Oct 29, 2018
MPI API: 3.1.0
Ident string: 3.1.3
Prefix: /usr/local/Cellar/open-mpi/3.1.3
Configured architecture: x86_64-apple-darwin17.7.0
Configure host: HighSierra-2.local
Configured by: brew
Configured on: Tue Oct 30 18:09:06 GMT 2018
Configure host: HighSierra-2.local
Configure command line: '--prefix=/usr/local/Cellar/open-mpi/3.1.3'
'--disable-dependency-tracking'
'--disable-silent-rules' '--enable-ipv6'
'--with-libevent=/usr/local/opt/libevent'
'--with-sge'
Built by: brew
Built on: Tue Oct 30 18:27:08 GMT 2018
Built host: HighSierra-2.local
C bindings: yes
C++ bindings: no
Fort mpif.h: yes (single underscore)
Fort use mpi: yes (full: ignore TKR)
Fort use mpi size: deprecated-ompi-info-value
Fort use mpi_f08: yes
Fort mpi_f08 compliance: The mpi_f08 module is available, but due to
limitations in the gfortran compiler and/or Open
MPI, does not support the following: array
subsections, direct passthru (where possible) to
underlying Open MPI's C functionality
Fort mpi_f08 subarrays: no
Java bindings: no
Wrapper compiler rpath: unnecessary
C compiler: clang
C compiler absolute: /usr/local/Homebrew/Library/Homebrew/shims/mac/super/clang
C compiler family name: GNU
C compiler version: 4.2.1
C++ compiler: clang++
C++ compiler absolute: /usr/local/Homebrew/Library/Homebrew/shims/mac/super/clang++
Fort compiler: gfortran
Fort compiler abs: /usr/local/opt/gcc/bin/gfortran
Fort ignore TKR: yes (!GCC$ ATTRIBUTES NO_ARG_CHECK ::)
Fort 08 assumed shape: yes
….
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Received on Wed Dec 05 2018 - 14:00:02 PST
