Respected sir,
Is there any other way to plot and so that we can compare our plot of RMSD
WITH RMSF OF SAME MOLECULE?
On Sat, Nov 24, 2018 at 8:13 PM David Case <david.case.rutgers.edu> wrote:
> On Sat, Nov 24, 2018, Charu Sharma (JRF) wrote:
>
> >I have one question how to plot RMSF and calculate (root mean square
> >fluctation of dialanine peptide and polyAT DNA
>
> Please look at the "atomicfluct" (aka "rmsf") action in cpptraj. People
> generally have their own preferences for how to plot data; cpptraj is
> generally hooked in with xmgrace, but you can use other programs
> (including a spreadsheet program) to obtain plots.
>
> ....dac
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Nov 25 2018 - 21:00:02 PST
