From: David Case <>
Date: Sat, 24 Nov 2018 14:41:26 +0000

On Sat, Nov 24, 2018, Charu Sharma (JRF) wrote:

>I have one question how to plot RMSF and calculate (root mean square
>fluctation of dialanine peptide and polyAT DNA

Please look at the "atomicfluct" (aka "rmsf") action in cpptraj. People
generally have their own preferences for how to plot data; cpptraj is
generally hooked in with xmgrace, but you can use other programs
(including a spreadsheet program) to obtain plots.


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Received on Sat Nov 24 2018 - 07:00:02 PST
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