Below is what I obtained:
lep.lep-VirtualBox:~/amber18$ source amber.sh
AMBERHOME = /home/lep/amber18
/home/lep/amber18/lib/python2.7/site-packages/
However, I was able to install gfortran3 using the commands
sudo bash
apt-get -y install libgfortran3
After I change dir to /amber18/bin/, I then invoke:
LD_LIBRARY_PATH=/usr/lib/x86_64-linux-gnu/libgfortran.so.3
and sander now runs.
Thanks.
-----Original Message-----
From: Dwight McGee <dwight.mcgee.gmail.com>
Sent: Saturday, September 15, 2018 7:36 PM
To: AMBER Mailing List <amber.ambermd.org>
Subject: Re: [AMBER] Installing fortran in Ubuntu-64 for Sander
Hi,
Type:
source $AMBERHOME/amber.sh
Sent from my iPhone
> On Sep 15, 2018, at 4:03 PM, <leifepeterson.sbcglobal.net>
<leifepeterson.sbcglobal.net> wrote:
>
> When running sander, am getting the error: error while loading shared
> libraries: libgfortran.so.3: cannot open shared object file: No such
> file or directory
>
>
>
> I installed gfortran in Ubuntu-64, using the commands:
>
>
>
> sudo bash
>
> apt-get -y install gfortran
>
>
>
> but after the install, I only see libgfortran.so in folder
> /usr/lib/gcc/x86_64-linux-gnu/7/ and not libgfortran.so.3
>
>
>
> Am I doing something wrong?
>
>
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
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Received on Sat Sep 15 2018 - 19:30:02 PDT
