Re: [AMBER] Amber16 Installation error

From: Sushi Shilpa <sushishilpa.gmail.com>
Date: Fri, 3 Aug 2018 17:44:15 +0530

Hi,

Root, I have permission

On Fri, Aug 3, 2018 at 5:38 PM, Matias Machado <mmachado.pasteur.edu.uy>
wrote:

> Other hints...
>
> do you have the right permissions to do it?
> are you as installing as sudoer or root?
>
> Best,
>
> Matias
>
> ----- Mensaje original -----
> De: "Matias Machado" <mmachado.pasteur.edu.uy>
> Para: "AMBER Mailing List" <amber.ambermd.org>
> Enviados: Viernes, 3 de Agosto 2018 9:04:44
> Asunto: Re: [AMBER] Amber16 Installation error
>
> Dear Sushi,
>
> So, the common hints would be...
>
> in which shell are you are running?
> have you sourced the .barshrc after adding the line? [
> http://archive.ambermd.org/201707/0326.html]
> are you using a custom python installation? [http://archive.ambermd.org/
> 201709/0142.html]
> have you checked your PYTHONPATH? [http://archive.ambermd.org/
> 201709/0141.html]
>
> Best,
>
> Matias
>
> ----- Mensaje original -----
> De: "Sushi Shilpa" <sushishilpa.gmail.com>
> Para: "AMBER Mailing List" <amber.ambermd.org>
> Enviados: Viernes, 3 de Agosto 2018 8:44:20
> Asunto: Re: [AMBER] Amber16 Installation error
>
> Dear Matias,
>
> I have checked, since I am new to the AMBER, I couldn't get proper
> solution, if you can solve this, could you please write in details.
>
>
> Best
>
> Shilpa T
>
> On Fri, Aug 3, 2018 at 5:08 PM, Matias Machado <mmachado.pasteur.edu.uy>
> wrote:
>
> > Dear Sushi,
> >
> > Have you check carefully these posts from the mailing list?
> >
> > http://archive.ambermd.org/201707/0309.html
> > http://archive.ambermd.org/201709/0142.html
> >
> > Best,
> >
> > Matias
> >
> > ------------------------------------
> > PhD.
> > Researcher at Biomolecular Simulations Lab.
> > Institut Pasteur de Montevideo | Uruguay
> > [http://pasteur.uy/en/laboratorios-eng/lsbm]
> > [http://www.sirahff.com]
> >
> > ----- Mensaje original -----
> > De: "Sushi Shilpa" <sushishilpa.gmail.com>
> > Para: "AMBER Mailing List" <AMBER.ambermd.org>
> > Enviados: Viernes, 3 de Agosto 2018 7:46:33
> > Asunto: [AMBER] Amber16 Installation error
> >
> > Dear Amber users,
> >
> >
> > I am installing Amber16 and Amber ools 17, I have followed the steps ./
> > configure gnu, then make install, while running make test. I am getting
> an
> > error message given below.
> >
> > make[1]: Entering directory
> > `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
> > ./test_at_serial.sh
> > Error: Could not import Amber Python modules!
> > Probably your Amber Python environment was not set up correctly.
> >
> > We recommend adding the line:
> >
> > test -f /home/kavya/Documents/shilpa/amber16/amber.sh && source
> > /home/kavya/Documents/shilpa/amber16/amber.sh (sh/bash/zsh)
> > or
> > test -f /home/kavya/Documents/shilpa/amber16/amber.csh && source
> > /home/kavya/Documents/shilpa/amber16/amber.csh (csh/tcsh)
> >
> > to your login shell resource file (e.g., ~/.bashrc or ~/.cshrc).
> > make[1]: *** [test] Error 1
> > make[1]: Leaving directory
> > `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
> > make: *** [test.serial] Error 2
> >
> >
> > I have added these lines and I have searched for the answer in the amber
> > mailing list but couldn't solve the issue.
> >
> > Please help me to solve this issue.
> >
> >
> > Sincerely,
> >
> > Shilpa T
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Received on Fri Aug 03 2018 - 05:30:03 PDT
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