Re: [AMBER] Amber16 Installation error

From: Matias Machado <mmachado.pasteur.edu.uy>
Date: Fri, 03 Aug 2018 09:08:17 -0300 (UYT)

Other hints...

do you have the right permissions to do it?
are you as installing as sudoer or root?

Best,

Matias

----- Mensaje original -----
De: "Matias Machado" <mmachado.pasteur.edu.uy>
Para: "AMBER Mailing List" <amber.ambermd.org>
Enviados: Viernes, 3 de Agosto 2018 9:04:44
Asunto: Re: [AMBER] Amber16 Installation error

Dear Sushi,

So, the common hints would be...

in which shell are you are running?
have you sourced the .barshrc after adding the line? [http://archive.ambermd.org/201707/0326.html]
are you using a custom python installation? [http://archive.ambermd.org/201709/0142.html]
have you checked your PYTHONPATH? [http://archive.ambermd.org/201709/0141.html]

Best,

Matias

----- Mensaje original -----
De: "Sushi Shilpa" <sushishilpa.gmail.com>
Para: "AMBER Mailing List" <amber.ambermd.org>
Enviados: Viernes, 3 de Agosto 2018 8:44:20
Asunto: Re: [AMBER] Amber16 Installation error

Dear Matias,

I have checked, since I am new to the AMBER, I couldn't get proper
solution, if you can solve this, could you please write in details.


Best

Shilpa T

On Fri, Aug 3, 2018 at 5:08 PM, Matias Machado <mmachado.pasteur.edu.uy>
wrote:

> Dear Sushi,
>
> Have you check carefully these posts from the mailing list?
>
> http://archive.ambermd.org/201707/0309.html
> http://archive.ambermd.org/201709/0142.html
>
> Best,
>
> Matias
>
> ------------------------------------
> PhD.
> Researcher at Biomolecular Simulations Lab.
> Institut Pasteur de Montevideo | Uruguay
> [http://pasteur.uy/en/laboratorios-eng/lsbm]
> [http://www.sirahff.com]
>
> ----- Mensaje original -----
> De: "Sushi Shilpa" <sushishilpa.gmail.com>
> Para: "AMBER Mailing List" <AMBER.ambermd.org>
> Enviados: Viernes, 3 de Agosto 2018 7:46:33
> Asunto: [AMBER] Amber16 Installation error
>
> Dear Amber users,
>
>
> I am installing Amber16 and Amber ools 17, I have followed the steps ./
> configure gnu, then make install, while running make test. I am getting an
> error message given below.
>
> make[1]: Entering directory
> `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
> ./test_at_serial.sh
> Error: Could not import Amber Python modules!
> Probably your Amber Python environment was not set up correctly.
>
> We recommend adding the line:
>
> test -f /home/kavya/Documents/shilpa/amber16/amber.sh && source
> /home/kavya/Documents/shilpa/amber16/amber.sh (sh/bash/zsh)
> or
> test -f /home/kavya/Documents/shilpa/amber16/amber.csh && source
> /home/kavya/Documents/shilpa/amber16/amber.csh (csh/tcsh)
>
> to your login shell resource file (e.g., ~/.bashrc or ~/.cshrc).
> make[1]: *** [test] Error 1
> make[1]: Leaving directory
> `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
> make: *** [test.serial] Error 2
>
>
> I have added these lines and I have searched for the answer in the amber
> mailing list but couldn't solve the issue.
>
> Please help me to solve this issue.
>
>
> Sincerely,
>
> Shilpa T
> _______________________________________________
> AMBER mailing list
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>
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Received on Fri Aug 03 2018 - 05:30:02 PDT
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