problem solved.
2018-04-06 9:20 GMT-03:00 Diego Gomes <diego.enry.gmail.com>:
> Try changing the format to "NETCDF" I believe that's now the default
> format.
>
> vmd polyAT_vac.prmtop -netcdf polyAT_vac_md1_12Acut.mdcrd
>
> Renaming your trajectories to ".nc" will make things more straightforward.
> vmd polyAT_vac.prmtop polyAT_vac_md1_12Acut.nc
>
>
>
>
>
>
> On Fri, Apr 6, 2018 at 2:07 PM, Edjan Silva <edjan.silva.esenfar.ufal.br>
> wrote:
>
> > I did all the tutorial steps, successfully. First I loaded the file "
> > *polyAT_vac.prmtop*" and I determined the file type as "*AMBER7 Parm*".
> > Then I loaded the file "*polyAT_vac_md1_12Acut.mdcrd"* and determined
> the
> > file type as" *AMBER coordinates with periodic box* ". However, the
> number
> > of frames that appears in the VMD is 0 (the correct one would be 1000
> > frames). What went wrong? Attached my Input Files: polyAT_vac.prmtop
> > polyAT_vac_md1_12Acut.mdcrd
> > _______________________________________________
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> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Diego Enry B. Gomes, PhD
> Diretoria de Metrologia Aplicada às Ciências da Vida.
> Instituto Nacional de Metrologia, Qualidade e Tecnologia
> +55 21 2145 3262 (3265, 3070, 3075) | dgomes.pq.cnpq.br
>
> Laboratoire d'Ingénierie des Fonctions Moléculaires
> Université de Strasbourg - France - 06 24 32 39 17
> +33 06 2432 3917
> _______________________________________________
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>
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Received on Thu Apr 12 2018 - 08:30:02 PDT
