Try changing the format to "NETCDF" I believe that's now the default format.
vmd polyAT_vac.prmtop -netcdf polyAT_vac_md1_12Acut.mdcrd
Renaming your trajectories to ".nc" will make things more straightforward.
vmd polyAT_vac.prmtop polyAT_vac_md1_12Acut.nc
On Fri, Apr 6, 2018 at 2:07 PM, Edjan Silva <edjan.silva.esenfar.ufal.br>
wrote:
> I did all the tutorial steps, successfully. First I loaded the file "
> *polyAT_vac.prmtop*" and I determined the file type as "*AMBER7 Parm*".
> Then I loaded the file "*polyAT_vac_md1_12Acut.mdcrd"* and determined the
> file type as" *AMBER coordinates with periodic box* ". However, the number
> of frames that appears in the VMD is 0 (the correct one would be 1000
> frames). What went wrong? Attached my Input Files: polyAT_vac.prmtop
> polyAT_vac_md1_12Acut.mdcrd
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--
Diego Enry B. Gomes, PhD
Diretoria de Metrologia Aplicada às Ciências da Vida.
Instituto Nacional de Metrologia, Qualidade e Tecnologia
+55 21 2145 3262 (3265, 3070, 3075) | dgomes.pq.cnpq.br
Laboratoire d'Ingénierie des Fonctions Moléculaires
Université de Strasbourg - France - 06 24 32 39 17
+33 06 2432 3917
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Received on Fri Apr 06 2018 - 05:30:04 PDT
