Hi
Try: source amber.sh
Hai
On Sun, Feb 25, 2018 at 12:18 PM Jennifer L. Muzyka <
jennifer.muzyka.centre.edu> wrote:
> We are working through the tutorials for AmberTools 17 found in the Amber
> 2017 manual. We get stuck on the one involving pdb4amber (page 200). When
> we use the command pdb4amber -i orig.pdb, -o new.pdb —reduce —dry, we get a
> message that says
> Traceback (most recent call last):
> File “/opt/amber16/bin/pdb4amber”, line 6, in <module>
> from pdb4amber import pdb4amber
> ImportError: No module named pdb4amber
>
> This error message confuses us, as we can see a file named pdb4amber in
> the amber/bin directory. We’d appreciate any information you can offer
> about what’s going on. I assume that perhaps I went wrong somewhere in the
> installation process.
> Thanks.
> Jennifer
>
>
>
>
> Jennifer Muzyka
> Stodghill Professor of Chemistry
> Centre College
> 600 West Walnut Street
> Danville, KY 40422
>
> jennifer.muzyka.centre.edu<mailto:jennifer.muzyka.centre.edu>
> http://web.centre.edu/muzyka
> http://organicers.org
>
> 859-238-5413
> fax 859-236-7925
>
>
>
>
>
>
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>
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Received on Sun Feb 25 2018 - 11:00:02 PST
