Re: [AMBER] Equilibration

From: <sara.iti.lk>
Date: Thu, 23 Nov 2017 12:00:54 +0530

Dear Bill,

I checked the RMS fittings and observed that there was a prominent
fluctuation in the RMSD of the terminal residues (19 residues). I have
attached images of the protein showing the terminal residue and the RMSD
fluctuation. Shall i continue with the production or do I have to
cap/remove the terminal and start over.

Best REgards,
Sara

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber

rmsd_fluctuations.png
(image/png attachment: rmsd_fluctuations.png)

ACE.png
(image/png attachment: ACE.png)

Received on Wed Nov 22 2017 - 23:00:03 PST
Custom Search