I just installed AmberTools 17 on a fresh install of High Sierra MacOS
10.13. So this information might be of use to you. gcc49 is not available
on macports, so I opted for *gcc5*. I had no issues, and both installed and
were able to be selected:
sudo port install gcc5
sudo port install mpich-gcc5
sudo port select --set gcc mp-gcc5
sudo port select --set mpi mpich-gcc5-fortran
# Installed serial amber first to test
./configure gnu
make install
make test
# Installed mpi version with mac accelerate
./configure -macAccelerate -mpi gnu
make install
export DO_PARALLEL='mpirun -np 2'
make test.parallel
export DO_PARALLEL='mpirun -np 4'
make test.parallel
This installed fine for me. I had to use clang with the previous version of
AmberTools like 6 months ago, but gnu appears to work fine on AT 17 and on
newer versions of MacOS.
On Fri, Oct 13, 2017 at 5:08 AM, David A Case <david.case.rutgers.edu>
wrote:
>
> On Fri, Oct 13, 2017, huangwc8 wrote:
> >
> > I am trying to install Ambertools 17 onto Macbook Sierra 10.12
> >
> > The Fortran version is 配置為：../gcc-6.3.0/configure
> > 6.3.0
>
> What is the result of typing "which gfortran" at the command prompt?
>
> > Error: Unable to compile mixed C/Fortran code.
> > Please check your compiler settings and configure flags.
>
> I suspect that you are not using one of the "magic" versions of gfortran
> that works with clang.
>
> Since you have compilers installed via macports, I'd recommend configuring
> with "gnu" rather than "clang" as the compiler option. (Avoid using
> gcc7 if you can.)
>
> ...good luck....dac
>
>
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--
Andrew Schaub
Graduate Program in Chemical & Structural Biology
Tsai Lab, http:///www.tsailabuci.com/
Luo Lab, http://rayl0.bio.uci.edu/html/
University of California, Irvine
Irvine, CA 92697-2280
949-824-8829 (lab)
949-877-9380 (cell)
aschaub.uci.edu
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Received on Mon Oct 16 2017 - 15:00:03 PDT
