Hi, Our system consist of two fragments, one have 324 residues while
other fragment consist 43 A.A residues. I want to study the conformation
changes when the smaller fragment of amino acids docked with the larger
fragment. how i manage these two fragment in the single pdb file.
Regards
On Wed, Sep 20, 2017 at 9:36 PM, Elvis Martis <elvis.martis.bcp.edu.in>
wrote:
> The nature of simulations will depend on what exactly you want to study.
>
> Best Regards
> Elvis Martis
> Mumbai, INDIA.
>
> ________________________________________
> From: Rana Rehan Khalid <rrkhalid.umich.edu>
> Sent: 20 September 2017 21:56
> To: AMBER Mailing List
> Subject: [AMBER] simulation of docked domains of protein
>
> Hi everybody
>
> I docked the two domains of protein and want to study the simulation of
> docked domain is there any tutorial to deal with such kind of simulation
>
> Thanks.
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Received on Wed Sep 20 2017 - 13:00:03 PDT
