hi
which compiler version you are using?
gcc --version
If it's too old (4.1?), you should upgrade your compiler:
>= 4.4 seems working fine for AT16. Related topic:
http://archive.ambermd.org/201606/0051.html
PS: Since AmberTools 16 was released before GNU v>=6., so try something
between 4.4 and v5.
Hai
On Wed, Feb 15, 2017 at 12:27 PM, ABHIJEET CHOWDHURY <
f2013854.pilani.bits-pilani.ac.in> wrote:
> Hello,
>
> Yeah, I got the file and now it works. Thank you. Now I have a different
> problem as soon as I try to compile AMBER it gives the following error:
>
> In file qm2_extern_gau_module.F90:357
>
> intrinsic :: is_iostat_end1
> Error: Intrinsic at (1) does not exist
> In file qm2_extern_gau_module.F90:476
>
> done = is_iostat_end(ios) .or. (i == 3)
> 1
> Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
> In file qm2_extern_gau_module.F90:492
>
> done = done .or. is_iostat_end(ios)
> 1
> Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
> make[2]: *** [qm2_extern_gau_module.o] Error 1
> make[2]: Leaving directory
> `/home/divya/AMBER16/amber16/AmberTools/src/sander'
> make[1]: *** [serial] Error 2
> make[1]: Leaving directory `/home/divya/AMBER16/amber16/AmberTools/src'
> make: *** [install] Error 2
>
> Regards,
> Abhijeet Chowdhury
>
>
>
>
>
> On Wed, Feb 15, 2017 at 6:56 PM, Hai Nguyen <nhai.qn.gmail.com> wrote:
>
> > Hi,
> >
> > can you open the AmberTools/src/configure_python file, looking for the
> > line
> >
> > wget https://repo.continuum.io/miniconda/Miniconda${version}
> > -latest-Linux-x86_64.sh
> >
> > and change it to
> >
> > wget https://repo.continuum.io/miniconda/Miniconda${version}
> > -latest-Linux-x86_64.sh --no-check-certificate
> >
> > Hai
> >
> > On Wed, Feb 15, 2017 at 8:13 AM, ABHIJEET CHOWDHURY <
> > f2013854.pilani.bits-pilani.ac.in> wrote:
> >
> > > Dear users,
> > >
> > > While installing AMBER 16, I am having the following problem as I try
> > > to run the configure file.
> > >
> > > Downloading Python 2.7 Miniconda
> > > Detected Linux kernel. Downloading the Linux installer
> > > Downloading the latest Miniconda distribution
> > > Detected 64-bit Linux
> > > --18:14:56-- https://repo.continuum.io/miniconda/Miniconda-latest-
> > > Linux-x86_64.sh
> > > Resolving repo.continuum.io... 104.16.18.10, 104.16.19.10,
> > > 2400:cb00:2048:1::6810:120a, ...
> > > Connecting to repo.continuum.io|104.16.18.10|:443... connected.
> > > ERROR: cannot verify repo.continuum.io's certificate, issued by
> > > `/C=US/O=thawte, Inc./CN=thawte SSL CA - G2':
> > > Unable to locally verify the issuer's authority.
> > > To connect to repo.continuum.io insecurely, use
> > `--no-check-certificate'.
> > > Unable to establish SSL connection.
> > > Problem installing Miniconda... see error above.
> > > Configure failed due to the errors above!
> > >
> > > I know it's not directly related to AMBER but if someone has some
> > > suggestions, it would be helpful.
> > >
> > > Regards,
> > > Abhijeet Chowdhury
> > >
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
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Received on Wed Feb 15 2017 - 10:30:02 PST
