Re: [AMBER] Installation problem with miniconda

From: ABHIJEET CHOWDHURY <f2013854.pilani.bits-pilani.ac.in>
Date: Wed, 15 Feb 2017 22:57:58 +0530

Hello,

Yeah, I got the file and now it works. Thank you. Now I have a different
problem as soon as I try to compile AMBER it gives the following error:

In file qm2_extern_gau_module.F90:357

    intrinsic :: is_iostat_end1
Error: Intrinsic at (1) does not exist
 In file qm2_extern_gau_module.F90:476

         done = is_iostat_end(ios) .or. (i == 3)
               1
Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
 In file qm2_extern_gau_module.F90:492

            done = done .or. is_iostat_end(ios)
                           1
Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
make[2]: *** [qm2_extern_gau_module.o] Error 1
make[2]: Leaving directory
`/home/divya/AMBER16/amber16/AmberTools/src/sander'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/home/divya/AMBER16/amber16/AmberTools/src'
make: *** [install] Error 2

Regards,
Abhijeet Chowdhury





On Wed, Feb 15, 2017 at 6:56 PM, Hai Nguyen <nhai.qn.gmail.com> wrote:

> Hi,
>
> can you open the AmberTools/src/configure_python file, looking for the
> line
>
> wget https://repo.continuum.io/miniconda/Miniconda${version}
> -latest-Linux-x86_64.sh
>
> and change it to
>
> wget https://repo.continuum.io/miniconda/Miniconda${version}
> -latest-Linux-x86_64.sh --no-check-certificate
>
> Hai
>
> On Wed, Feb 15, 2017 at 8:13 AM, ABHIJEET CHOWDHURY <
> f2013854.pilani.bits-pilani.ac.in> wrote:
>
> > Dear users,
> >
> > While installing AMBER 16, I am having the following problem as I try
> > to run the configure file.
> >
> > Downloading Python 2.7 Miniconda
> > Detected Linux kernel. Downloading the Linux installer
> > Downloading the latest Miniconda distribution
> > Detected 64-bit Linux
> > --18:14:56-- https://repo.continuum.io/miniconda/Miniconda-latest-
> > Linux-x86_64.sh
> > Resolving repo.continuum.io... 104.16.18.10, 104.16.19.10,
> > 2400:cb00:2048:1::6810:120a, ...
> > Connecting to repo.continuum.io|104.16.18.10|:443... connected.
> > ERROR: cannot verify repo.continuum.io's certificate, issued by
> > `/C=US/O=thawte, Inc./CN=thawte SSL CA - G2':
> > Unable to locally verify the issuer's authority.
> > To connect to repo.continuum.io insecurely, use
> `--no-check-certificate'.
> > Unable to establish SSL connection.
> > Problem installing Miniconda... see error above.
> > Configure failed due to the errors above!
> >
> > I know it's not directly related to AMBER but if someone has some
> > suggestions, it would be helpful.
> >
> > Regards,
> > Abhijeet Chowdhury
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
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Received on Wed Feb 15 2017 - 09:30:03 PST
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