Hi all,
I've been trying to install Amber16 on 3 different machines at the moment and all installations have failed so far due to different reasons. I'll be posting only one for the moment for simplicity and try solving the rest in the meantime, so I'd appreciate any help on the issue.
OS of this computer is Centos 5.9, I tried installing Amber16 by first running the configure file with gnu compiler for basic mode (no parallel or GPU). After installing miniconda and the patch as the installer requested, all was fine and I continued with the "make install" command. All was fine until I hit the following error:
gfortran -Wall -Wno-unused-function -DBINTRAJ -DEMIL -c -O0 -fPIC -DNO_ALLOCATABLES_IN_TYPE -ffree-form -I../pbsa -I../sqm -I../rism -I../../../include -I/home/progs/amber16/include -I/home/progs/amber16/include -o qm2_extern_gau_module.o qm2_extern_gau_module.F90
In file qm2_extern_gau_module.F90:357
intrinsic :: is_iostat_end
1
Error: Intrinsic at (1) does not exist
In file qm2_extern_gau_module.F90:476
done = is_iostat_end(ios) .or. (i == 3)
1
Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
In file qm2_extern_gau_module.F90:492
done = done .or. is_iostat_end(ios)
1
Error: Function 'is_iostat_end' at (1) has no IMPLICIT type
make[2]: *** [qm2_extern_gau_module.o] Error 1
make[2]: Leaving directory `/home/progs/amber16/AmberTools/src/sander'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/home/progs/amber16/AmberTools/src'
make: *** [install] Error 2
The past archives have one post related to the issue, where the problem was told to be (possibly) about the gcc compiler version < 4.5. I updated all gnu compilers before I begun (gcc, g++, gfortran), and my version info shows 4.4.5 so that shouldn't be a problem, but things can go wrong in many ways or the installation might be calling an obsolete version.
Sorry if I skipped any information you might need, I'd be glad to answer any further questions you might have. I appreciate your help.
Thank you,
Alican
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Received on Fri Jun 03 2016 - 04:30:01 PDT
