If you copy your leap session with error messages, it could help to see
what you did and the result.
Bill
On 2/22/16 1:15 AM, Jesmita Dhar wrote:
> Dear Sir/Madam,
> I want to simulate a complexed protein docked
> with a peptide that contain an isoaspartic acid. I have used
> antechember. But the parameter file I got, can not be used to generate
> topology file for the complexed protein using leap. I would be helpful
> if you can guide me to generate the parameter file for the isoaspartic
> acid.
> Waiting for your reply..
>
> Thanks
>
> Jesmita Dhar
>
> SRF,Bose Institute
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Feb 22 2016 - 01:30:06 PST
