Re: [AMBER] parameter file for isoaspartate acid

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Mon, 22 Feb 2016 01:18:57 -0800

If you copy your leap session with error messages, it could help to see
what you did and the result.

Bill

On 2/22/16 1:15 AM, Jesmita Dhar wrote:
> Dear Sir/Madam,
> I want to simulate a complexed protein docked
> with a peptide that contain an isoaspartic acid. I have used
> antechember. But the parameter file I got, can not be used to generate
> topology file for the complexed protein using leap. I would be helpful
> if you can guide me to generate the parameter file for the isoaspartic
> acid.
> Waiting for your reply..
>
> Thanks
>
> Jesmita Dhar
>
> SRF,Bose Institute
>
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Received on Mon Feb 22 2016 - 01:30:06 PST
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