Dear amber users,
Iam trying to study DNA-protein interaction with Amber12
(ff12SB). The crystal structure contains single MG atom with net charge
zero.However i was unable to generate prmtop and prmcrd files. its showing
MG atom type not found.I will be very much thankful, if you kindly help me
regarding this.
*Note: I gone through the previous threads regarding this issue and taken
into consideration, i changed atom type MG to MG2 in pdb file i can able to
generate prmtop and crd files by using ff99SB but here i want to use
ff12SB.*
*Thanks & Regards,*
*Yogeeshwar Ajjugal.*
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Received on Tue Feb 16 2016 - 05:00:04 PST
