Dear Hai
Thanks a lot for your response and sorry for my late reply.
The input file is working.
Thanks a lot...
Have a good day!!!
Vince
2016-02-10 16:51 GMT+01:00 Hai Nguyen <nhai.qn.gmail.com>:
> you can use cpptraj to do that
>
> cat > traj.in <<EOF
> parm your_pdb.pdb
> trajin your_pdb.pdb
> distance .3 .7 out atom_3_7_distance.dat
> EOF
>
> cpptraj -i traj.in
>
> Hai
>
> On Wed, Feb 10, 2016 at 10:39 AM, Vasantha Kumar <vin.vasanth.gmail.com>
> wrote:
>
> > Dear AMBER user
> >
> >
> > Is there is a way to extract distances between atoms directly from a PDB
> > file. Could you please suggest me some scripts or software package?
> >
> > thanks in advance..
> > Vince
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Received on Mon Feb 15 2016 - 03:00:03 PST
