>> make install as root
I found that I had to install parmed as root. ubuntu 14.04, python 2.7.6
installed via the usual apt-get python.
Josh
On 3 February 2016 at 13:49, Jason Swails <jason.swails.gmail.com> wrote:
> On Wed, Feb 3, 2016 at 12:02 AM, Joseph Baker <bakerj.tcnj.edu> wrote:
>
> > Hi again,
> >
> > I was able to get the MMPBSA.py script to work by going explicitly into
> the
> > /share/apps/amber14/AmberTools/src/mmpbsa_py/ directory and running make
> > install as root
> >
> > Before this I had run update_amber and configure and made sure all
> patches
> > were applied, etc., but it was not until explicitly going into the
> > mmpbsay_py directory and running make install by hand that whatever was
> > wrong got fixed.
> >
> > Does anyone know why this is the case?
> >
>
> That *shouldn't* be the case... Running "make install" inside $AMBERHOME
> automatically runs "make install" inside all of the subdirectories (or the
> equivalent of that). So I'm not sure why this worked and the normal
> install didn't. (Note, after applying updates, you have to recompile for
> the changes to take effect).
>
> HTH,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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>
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Received on Wed Feb 03 2016 - 06:00:05 PST
