[AMBER] Error message while running alanine dipeptide tutorial (minimization)

From: Nikolay N. Kuzmich <nnkuzmich.gmail.com>
Date: Fri, 27 Nov 2015 11:28:39 +0300

Dear Amber users,

When I launched minimization procedure in course of the alanine dipeptide
I have received an error message:

linux-0bye nikolay/Tutorial# $AMBERHOME/bin/sander -O -i 01_Min.in -o
01_Min.out -p prmtop -c inpcrd -r 01_Min.rst -inf 01_Min.mdinfo
At line 668 of file mdread1.F90 (unit = 5, file = '01_Min.in')
Fortran runtime error: End of file
linux-0bye nikolay/Tutorial#

I also have attached mdread1.F90 file which contains FATAL ERROR messages
in it.
Please tell me how could I fix it.

Kind regards,

Nikolay Kuzmich, PhD
Department of Drug Safety
Research Institute of Influenza
WHO National Influenza Centre of Russia
197376 Saint-Petersburg
15/17 Professor Popov St.
Tel.: +78124991559
Mobile: +79213491750
e-mail: nikolay.kuzmich.influenza.spb.ru

AMBER mailing list

Received on Fri Nov 27 2015 - 00:30:03 PST
Custom Search