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-- Jason M. Swails BioMaPS, Rutgers University Postdoctoral Researcher > On Nov 12, 2015, at 7:09 AM, Giovanni Bussi <giovanni.bussi.gmail.com> wrote: > > You have to use > > plumed patch --shared -p > > On Thu, Nov 12, 2015 at 11:40 AM, Sanjib Paul <sanjib88paul.gmail.com> > wrote: > >> Hello Giovanni, >> Sorry for late reply. I tried with the command you >> suggested me. This time nothing has happened. The message I am getting like >> following. >> >> $* plumed patch --shared* >> *plumed: /lib64/libz.so.1: no version information available (required by >> plumed)* >> *Nothing to do. -h for help* >> >> I got the message "*plumed: /lib64/libz.so.1: no version information >> available (required by plumed)*" also when I tried to patch by "plumed >> patch -p". But then patching has been done. This time nothing is happening. >> Any further suggestion will be precious to me. >> >> Thanking you. >> Sanjib >> >> On Mon, Nov 9, 2015 at 12:44 PM, Giovanni Bussi <giovanni.bussi.gmail.com> >> wrote: >> >>> Hi, >>> >>> can you try to patch using >>> plumed patch --shared >>> ? >>> >>> This should be more robust against missing C++ libraries in the linker. >>> >>> Let me know if this works. >>> >>> Giovanni >>> >>> >>> On Mon, Nov 9, 2015 at 6:24 AM, Sanjib Paul <sanjib88paul.gmail.com> >>> wrote: >>> >>>> Hello everyone, >>>> I have AMBER14 installed in my machine. Then I >> have >>>> installed PLUMED and patched it with AMBER. According to PLUMED >>>> installation procedure I had to recompile and re-install AMBER. Now I >>>> recompiled it but could not install. Installation process stopped >> giving >>>> some error messages. I have attached a image file of terminal showing >>> error >>>> messages. I tried to patch with mpi version of sander. >>>> I don't know whether it is appropriate place to >> ask >>>> this question or not. But I am going through this problem form last few >>>> days. So, I had to ask. I will be very grateful if someone give me any >>>> suggestion to get out of this problem. >>>> >>>> Thanking you. >>>> Sanjib >>>> >>>> _______________________________________________ >>>> AMBER mailing list >>>> AMBER.ambermd.org >>>> http://lists.ambermd.org/mailman/listinfo/amber >>> _______________________________________________ >>> AMBER mailing list >>> AMBER.ambermd.org >>> http://lists.ambermd.org/mailman/listinfo/amber >> _______________________________________________ >> AMBER mailing list >> AMBER.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Thu Nov 12 2015 - 05:00:06 PST