Re: [AMBER] PLUMED patching with AMBER

From: Giovanni Bussi <giovanni.bussi.gmail.com>
Date: Thu, 12 Nov 2015 13:09:53 +0100

You have to use

plumed patch --shared -p

On Thu, Nov 12, 2015 at 11:40 AM, Sanjib Paul <sanjib88paul.gmail.com>
wrote:

> Hello Giovanni,
> Sorry for late reply. I tried with the command you
> suggested me. This time nothing has happened. The message I am getting like
> following.
>
> $* plumed patch --shared*
> *plumed: /lib64/libz.so.1: no version information available (required by
> plumed)*
> *Nothing to do. -h for help*
>
> I got the message "*plumed: /lib64/libz.so.1: no version information
> available (required by plumed)*" also when I tried to patch by "plumed
> patch -p". But then patching has been done. This time nothing is happening.
> Any further suggestion will be precious to me.
>
> Thanking you.
> Sanjib
>
> On Mon, Nov 9, 2015 at 12:44 PM, Giovanni Bussi <giovanni.bussi.gmail.com>
> wrote:
>
> > Hi,
> >
> > can you try to patch using
> > plumed patch --shared
> > ?
> >
> > This should be more robust against missing C++ libraries in the linker.
> >
> > Let me know if this works.
> >
> > Giovanni
> >
> >
> > On Mon, Nov 9, 2015 at 6:24 AM, Sanjib Paul <sanjib88paul.gmail.com>
> > wrote:
> >
> > > Hello everyone,
> > > I have AMBER14 installed in my machine. Then I
> have
> > > installed PLUMED and patched it with AMBER. According to PLUMED
> > > installation procedure I had to recompile and re-install AMBER. Now I
> > > recompiled it but could not install. Installation process stopped
> giving
> > > some error messages. I have attached a image file of terminal showing
> > error
> > > messages. I tried to patch with mpi version of sander.
> > > I don't know whether it is appropriate place to
> ask
> > > this question or not. But I am going through this problem form last few
> > > days. So, I had to ask. I will be very grateful if someone give me any
> > > suggestion to get out of this problem.
> > >
> > > Thanking you.
> > > Sanjib
> > >
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> >
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Received on Thu Nov 12 2015 - 04:30:03 PST
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