Re: [AMBER] How can amber differentiate between terminal Oxygens

From: Hadeer ELHabashy <hadeer.elhabashi.gmail.com>
Date: Mon, 26 Oct 2015 15:37:50 +0200

 echo $PYTHONPATH
amber12/lib/python2.7/site-packages: amber12/lib/python2.7/site-packages
 which parmed.py
amber12/bin/parmed.py
 echo $AMBERHOME
home/software/amber12



On Mon, Oct 26, 2015 at 3:09 PM, Jason Swails <jason.swails.gmail.com>
wrote:

> On Mon, Oct 26, 2015 at 8:58 AM, Hadeer ELHabashy <
> hadeer.elhabashi.gmail.com> wrote:
>
> > Dear Dr.Jason
> >
> > I have Amber12 but AmberTools15
> > I ran the "make test.parmed", it was done successfully !
> > No, I did not install any other version of ParmEd .
> >
> > I tried one more time and I am still having this error
> >
>
> ​What is the output of the following commands:
>
> echo $PYTHONPATH
>
> which parmed.py
>
> echo $AMBERHOME
>
> ?
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Mon Oct 26 2015 - 07:00:03 PDT
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