Re: [AMBER] What is the formula for calculating EPtot?

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 15 Oct 2015 07:52:58 -0400

On Thu, Oct 15, 2015 at 5:26 AM, Yip Yew Mun <yipy0005.gmail.com> wrote:

> Hi,
>
> >From the md output file, I see these terms:
>
> BOND
> ANGLE
> DIHED
> 1-4 NB
> 1-4 EEL
> VDWAALS
> EELEC
> EGB
>

​All of them.

Have you tried it? If you add them together, do you get the same number as
EPtot? You should be able to figure this out just through a fairly simple
process of "try and compare".

HTH,
Jason

-- 
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu Oct 15 2015 - 05:00:05 PDT
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