[AMBER] Real-time hydrogen bond formation using VMD

From: Abhipriya K <abhipriya0406.gmail.com>
Date: Wed, 14 Oct 2015 11:51:52 +0530

Dear Amber users,

I am analyzing my simulation results using Visual Molecular Dynamics
program. I am able to generate the detailed output file of the hbond data.
But, I want to visualize the real-time hydrogen bond formation between two
residues/atoms. Is there any option for doing the same using VMD?

Any suggestions/help is highly appreciated.

Many thanks, 
-- 
Abhipriya
Junior Research Fellow
National Institute for Research in Reproductive Health (ICMR)
J.M. Street, Parel, Mumbai 400012
INDIA
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Received on Tue Oct 13 2015 - 23:30:02 PDT
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