On Mon, Oct 12, 2015, jagannath mondal wrote:
>
> I saw there is parameters of Bromide ion by Cheatham and coworker ( 2008
> J.Phys.chem B) that was parameterized in TIP3P water. Can one use this
> along with amber forcefield ?
Yes: the expectation is that you will use the Joung-Cheatham ion parameters
(choose the one that matches your water model) in conjunction with Amber
parameters for biomolecules.
....dac
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Received on Mon Oct 12 2015 - 06:00:08 PDT
