On Thu, Oct 8, 2015 at 12:41 PM, David A Case <david.case.rutgers.edu>
wrote:
> On Thu, Oct 08, 2015, Nicholus Bhattacharjee wrote:
> >
> > So considering helix
> > axis to be in the Y direction the box size will be somthing like 32.302 X
> > 84.333 X 34.369. Can it be done with the tleap? Thank you for the help.
>
> Yes, LEaP can do this: the "buffer" argument can be a list of three
> numbers, which are the buffer values to use in the x,y,z directions.
> Inside tleap, type "help solvateBox" to see a much fuller description of
> this option.
>
​Well look at that! I learn something new every day. Sorry for the
misinformation (I usually use solvateOct which doesn't have this option as
far as I can tell), and thanks for the tip.
All the best,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu Oct 08 2015 - 10:00:04 PDT
