Dear Jason;
Thank you for your kind reply.
2015-04-25 23:48 GMT+03:00 Jason Swails <jason.swails.gmail.com>:
> On Sat, Apr 25, 2015 at 2:39 PM, Gözde YALÇIN <yalcingozde88.gmail.com>
> wrote:
>
> > Dear Julio Dominguez
> >
> > As I see in the AMBER mailing archive, you have encountered the same
> > problem about the conversion of charmm pdb to Amber pdb. Sorry but could
> > you help me about how you solve this problem?
> >
>
> Michele did help -- he said that you should modify lines 83, 85, and 94 to
> read "22:27" instead of "22:26" -- he is referring to the file
> $AMBERHOME/AmberTools/src/etc/charmmlipid2amber.py. After you modify that
> file, making the replacements suggested, recompile AmberTools 14 to install
> your changes.
>
> HTH,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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>
--
Gözde YALÇIN
Research Assistant
Rize Recep Tayyip Erdogan University
Faculty of Engineering
Bioengineering Department
53100 Rize-Turkey
Ph.D. Student in Biotechnology
Ankara University
Biotechnology Institute
06110 Besevler/Ankara-Turkey
05065055074
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Received on Wed Apr 29 2015 - 00:30:03 PDT
