Subject: New web server for setup of membrane simulation systems
Dear MD community,
we have set up a web server that automatically sets up membrane
simulation systems containing an arbitrary mixture of different lipids.
The server, called MemGen (memgen.uni-goettingen.de) is not restricted
to a specific set of lipid types, force fields, or MD software. Instead,
MemGen works with any all-atom or united-atom lipid, any detergent,
alcolol, etc.
The user uploads the lipids in one of various file formats (pdb, crd,
xyz, ml2, gro), and the webserver returns a PDB file of the lipid patch
with the requested number relative concentration of the lipids,
requested number of water molecules per lipid, and salt content.
Counterions are always added.
Please give it a try at:
http://memgen.uni-goettingen.de/
Happy simulating,
The MemGen team at the University of Göttingen
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Received on Sun Feb 08 2015 - 04:00:03 PST
