Re: [AMBER] amber14 CUDA GPU for workstation?

From: Ross Walker <ross.rosswalker.co.uk>
Date: Tue, 30 Dec 2014 12:11:42 -0800

Hi Michael,

AmberTools does not have any programs that utilize GPUs. Do you have a
full copy of AMBER 14 or just AmberTools since the error message implies
the later?

All the best
Ross


On 12/30/14, 11:31 AM, "Michael Shokhen" <michael.shokhen.biu.ac.il> wrote:

>Hello,
>
>I am a new Amber user.
>I have succeeded with installation of amber14 regular variant,
>but unfortunately failed to install amber14 with GPU CUDA.
>I would appreciate if somebody can send me a set of commands
>relevant for amber14 with GPU CUDA installation on my Linux workstation.
>
>Thank you,
>Michael
>
>See below the details about my workstation,
>and system report about failed installation
>
>I have received an error message
>after running the commands:
>
>./config -cuda gnu
>make install
>
>
>
>shokhen.quant-lnx:~/amber14$ make install
>cd AmberTools/src && make install
>make[1]: Entering directory `/home/shokhen/amber14/AmberTools/src'
>AmberTools14 has no CUDA-enabled components
>(cd ../../src && make cuda )
>make[2]: Entering directory `/home/shokhen/amber14/src'
>make[2]: *** No rule to make target `cuda'. Stop.
>make[2]: Leaving directory `/home/shokhen/amber14/src'
>make[1]: [cuda] Error 2 (ignored)
>make[1]: Leaving directory `/home/shokhen/amber14/AmberTools/src'
>==============================================================
>/home/shokhen/amber14/src/Makefile not found, or -noamber was set.
>This is expected if you do not have Amber14.
>==============================================================
>
>*****************************
>Michael Shokhen, PhD
>Associate Professor
>Department of Chemistry
>Bar Ilan University,
>Ramat Gan, 52900
>Israel
>email: michael.shokhen.gmail.com
>email: shokhen.mail.biu.ac.il
>_______________________________________________
>AMBER mailing list
>AMBER.ambermd.org
>http://lists.ambermd.org/mailman/listinfo/amber



_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Dec 30 2014 - 12:30:02 PST
Custom Search