Hello everyone,
I am a new Amber user.I have finished the REMD simulaitons using Amber12 version. The jobs was frequently restarted for long simulations. Now I want to obtain the potential energy surface of the protein. How can I deal with the several stages of data? Which tool should I use?
By the way, I have read the Amber tutorials and I could extract temperature trajectories .But I didn't know how to analyze them for obtaining the whole potential energy surface. Thank you!
Wang moye
University of Chinese Academy of Sciences
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Received on Mon Dec 15 2014 - 23:00:02 PST
