Dear all, following the instructions to install Amber14, I get to the
same error after executing "./configure gnu". I tried three times,
starting with clean installs, but I keep getting the same error. Any
help would be kindly appreciated.
Regards,
Fernando
linux.Ubuntu1404:~/Downloads/Amber 14/amber14$ ./configure gnu
Checking for updates...
Checking for available patches online. This may take a few seconds...
Available AmberTools 14 patches:
No patches available
Available Amber 14 patches:
No patches available
./configure2: 128: [: /home/linux/Downloads/Amber: unexpected operator
stat: cannot stat ?/home/linux/Downloads/Amber?: No such file or directory
stat: cannot stat ?14/amber14?: No such file or directory
./configure2: 136: [: !=: unexpected operator
Searching for python2... Found python2.7: /usr/bin/python2.7
Obtaining the gnu suite version:
gcc -v
The version is 4.8.2
Testing the gcc compiler:
gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
OK
Testing the g++ compiler:
g++ -o testp testp.cpp
OK
Testing the gfortran compiler:
gfortran -O0 -o testp testp.f
OK
Testing mixed C/Fortran compilation:
gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -c -o
testp.c.o testp.c
gfortran -O0 -c -o testp.f.o testp.f
gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp
testp.c.o testp.f.o -lgfortran -w
OK
Testing pointer size:
gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o
test_pointer_size test_pointer_size.c
Detected 64 bit operating system.
Testing flex: OK
Checking NetCDF...
Using bundled NetCDF library.
Starting NetCDF build.
Configuring NetCDF C interface (may be time-consuming)...
Error: NetCDF C configure returned 1
NetCDF configure failed! Check the netcdf_config.log file
in the /home/linux/Downloads/Amber 14/amber14/AmberTools/src directory.
Configure failed due to the errors above!
linux.Ubuntu1404:~/Downloads/Amber 14/amber14$
PC specifications: Ubuntu 64 bits 14.04 LTS
Processor: Intel® Core? i3-3217U CPU . 1.80GHz × 4
Graphics: Intel® Ivybridge Mobile
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Nov 27 2014 - 01:30:02 PST
