On Fri, May 16, 2014 at 1:53 PM, Brian Radak <radak004.umn.edu> wrote:
> The ambmask syntax is quite robust albeit arguably less "natural" than
> VMD's syntax. Nonetheless it is equally as powerful in all situations I
> have encountered. I think there are some slight "gotchas" with distance
> based cutoffs, but that's it.
>
> It is also well described in the manual, although I forget if it is in the
> Amber or AmberTools version.
>
There's actually only one Amber manual for the Amber 14/AmberTools 14
release.
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Fri May 16 2014 - 21:00:02 PDT
