Re: [AMBER] Problems with the Amber-14 compilation with CUDA-5.5

From: James Starlight <jmsstarlight.gmail.com>
Date: Thu, 1 May 2014 18:06:05 +0400

David,


my $AMBERHOME/src/ consist of only link to config.h

If I use
./configure gnu
make install
(or just run install.sh)
I install Amber without any problems (but makefile in ../src is still
absent)

if I add -cuda flag to configure I've obtained above error.
It looks like some bug rather my inability to do simplest tasks. In any
case please provide me with step-by-step how I could compile gnu-based
amber because I've followed each step of manual.





2014-05-01 17:54 GMT+04:00 David A Case <case.biomaps.rutgers.edu>:

> On Thu, May 01, 2014, James Starlight wrote:
> >
> > Could you explain it in more details?
> >
> > Previously I've installed amber without cuda from the amber14 source dir
> > ./configure gnu
> > make install
>
> This won't install Amber14 if you don't have Amber14.
>
> > > > /home/own/amber14/src/Makefile not found,
>
> You need to use a terminal, or the Finder (or file explorer or
> something...),
> naviate to the /home/own/amber14/src directory, and see if you have a file
> called "Makefile".
>
> Details depend on the operating system you are using. If you are not used
> to
> doing things like this, see if you can find a friend with more computer
> experience to help out. You are going to need to be able to explore
> problems
> like this one to make effective use of Amber.
>
> ...dac
>
>
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>
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Received on Thu May 01 2014 - 07:30:02 PDT
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