On Tue, Jul 30, 2013, Catein Catherine wrote:
> Is "ff99 + Barcelona backbone torsion modifications" same as f99bsc0 for DNA?
Yes.
> Is ff12SB only available for AMBER12? Can we use ff12SB in AMBER 10?
Force fields are distributed as a part of AmberTools. You can use the
current AmberTools13 to prepare your prmtop files, but run them in Amber10 if
you like.
> Where can we download the AMBER10 and ambertools10(if any?)manuals?
We recommend that you use the current version of AmberTools. The Amber10
manual should be the the "amber10/doc" directory of your Amber10 distribution.
You say you are "using AMBER10 and AMBER12": I recommend that you just use
Amber12: Amber10 is now five years old, and lots of improvements have been
made since then.
...dac
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Received on Tue Jul 30 2013 - 11:00:03 PDT
