Re: [AMBER] The recommended way to create periodic box around lipid bilayer system ?

From: Daniel Roe <>
Date: Mon, 1 Jul 2013 13:30:27 -0600


On Mon, Jul 1, 2013 at 12:26 PM, Marek Maly <> wrote:
> This (or something close to this) perhaps could be done with image action of
> the ptraj/cptraj.

I would be interested to know if 'autoimage' from cpptraj works for
you since I haven't had many chances to test it with lipid bilayer
systems (although I have heard anecdotal evidence from others that it
seems to work fine).


Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
(801) 587-9652
(801) 585-9119 (Fax)
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Received on Mon Jul 01 2013 - 13:00:02 PDT
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