Hi All,
I am using following script to strip water and Na+ ions from my file:
parm complex_wat.prmtop
parmstrip :WAT
parmstrip :Na+
parmwrite out complex_nowat.prmtop
and I am geting following error:
WARNING in dispatchToken: Token string "parm" not found in tokenlist
WARNING in dispatchToken: Token string "complex_wat.prmtop" not found in
tokenlist
PTRAJ: parmstrip :WAT
WARNING in dispatchToken: Token string "parmstrip" not found in tokenlist
WARNING in dispatchToken: Token string ":wat" not found in tokenlist
PTRAJ: parmstrip :Na+
WARNING in dispatchToken: Token string "parmstrip" not found in tokenlist
WARNING in dispatchToken: Token string ":na+" not found in tokenlist
PTRAJ: parmwrite out complex_nowat.prmtop
WARNING in dispatchToken: Token string "parmwrite" not found in tokenlist
WARNING in dispatchToken: Token string "out" not found in tokenlist
WARNING in dispatchToken: Token string "complex_nowat.prmtop" not found in
tokenlist
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Received on Tue Jan 29 2013 - 08:30:02 PST
