Hi Ross, Thanks for quick answer. All the bugfixes was installed and I
double checked the version information before posting to the mailing list
(and that the patches were actually applied). In the mean time the system
administrators did some updates on the cuda installtion, and I re-compiled
from scratch again. Seems to work fine now, so I'm not completely sure what
caused the error.
Thanks again,
Lars
On Mon, Jan 28, 2013 at 2:12 AM, Ross Walker <ross.rosswalker.co.uk> wrote:
> Hi Lars,
>
> Are you sure bug fix.14 was correctly applied and the recompile worked? -
> Did you make clean first?
>
> Do you see this for every test? - Can you run one manually and report what
> you see for the version information in the file header.
>
> | GPU (CUDA) Version of PMEMD in use: NVIDIA GPU IN USE.
> | Version 12.2
> |
> | 01/10/2013
>
> All the best
> Ross
>
>
> /\
> \/
> |\oss Walker
>
> ---------------------------------------------------------
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Adjunct Assistant Professor |
> | Dept. of Chemistry and Biochemistry |
> | University of California San Diego |
> | NVIDIA Fellow |
> | http://www.rosswalker.co.uk | http://www.wmd-lab.org |
> | Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
> ---------------------------------------------------------
>
> Note: Electronic Mail is not secure, has no guarantee of delivery, may not
> be read every day, and should not be used for urgent or sensitive issues.
>
>
>
>
>
>
>
> On 1/27/13 1:01 PM, "Lars Skjærven" <lars.skjarven.biomed.uib.no> wrote:
>
> >Dear Amber users,
> >I just compiled pmemd.cuda using amber12 with all new patches. I get the
> >following error when running the tests:
> >
> >cudaMemcpyToSymbol: SetSim copy to cSim failed invalid device symbol
> >
> >I went through similar posts hoping to find a solution, but those relevant
> >should be fixed with bugfixes 9 and 14.
> >
> >Hoping for some tips.
> >
> >Many thanks,
> >Lars Skjærven
> >
> >
> >Cards: Tesla K20m
> >Driver Version: 310.19
> >Toolkit version: 5.0
> >
> >deviceQuery shows the following information:
> >Device 0: "Tesla K20m"
> > CUDA Driver Version / Runtime Version 5.0 / 5.0
> > CUDA Capability Major/Minor version number: 3.5
> >...
> >
> >CUDA Driver = CUDART, CUDA Driver Version = 5.0, CUDA Runtime Version =
> >5.0, NumDevs = 3, Device0 = Tesla K20m
> >_______________________________________________
> >AMBER mailing list
> >AMBER.ambermd.org
> >http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
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Received on Mon Jan 28 2013 - 03:30:04 PST
