Re: [AMBER] xlead

From: David A Case <case.biomaps.rutgers.edu>
Date: Tue, 15 Jan 2013 08:05:35 -0500

On Tue, Jan 15, 2013, aentrena wrote:

> Nevertheless, I have a problem with xleap program. When I start xleap,
> only one the ???XLEaP: Universe Editor??? window is open, as can be seen on
> the attached figure, and the following error is observed:

There is never more than one such window open; your screenshot looks fine.
>
>
> [~]$ xleap
> -I: Adding /home/programas/amber12/dat/leap/prep to search path.
> -I: Adding /home/programas/amber12/dat/leap/lib to search path.
> -I: Adding /home/programas/amber12/dat/leap/parm to search path.
> -I: Adding /home/programas/amber12/dat/leap/cmd to search path.
> Warning: Cannot convert string
> "-*-helvetica-medium-r-*-*-18-*-*-*-*-*-*-*" to type FontStruct
> Warning: Cannot convert string
> "-*-helvetica-medium-o-*-*-18-*-*-*-*-*-*-*" to type FontStruct

You can try to Google this and install some fonts, but if it were me, I'd just
ignore the warnings.

>
> When the "Xleap: Universe Editor" window is closed, another error is
> observed:
>
>
> [ ~]$ xleap
> -I: Adding /home/programas/amber12/dat/leap/prep to search path.
> -I: Adding /home/programas/amber12/dat/leap/lib to search path.
> -I: Adding /home/programas/amber12/dat/leap/parm to search path.
> -I: Adding /home/programas/amber12/dat/leap/cmd to search path.
> Warning: Cannot convert string
> "-*-helvetica-medium-r-*-*-18-*-*-*-*-*-*-*" to type FontStruct
> Warning: Cannot convert string
> "-*-helvetica-medium-o-*-*-18-*-*-*-*-*-*-*" to type FontStruct
> XIO: fatal IO error 11 (Resource temporarily unavailable) on X server
> ":0.0"
> after 1897 requests (1897 known processed) with 0 events
> remaining.

I'm lost here: the Universe Editor window should only be closed when your
xleap session is done. So, is this really a problem? Basically, do you have
annoying warnings and message, or do you really have a non-funcioning xleap?

...dac


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Jan 15 2013 - 05:30:06 PST
Custom Search