Re: [AMBER] Problem Installing Amber on Mac OSX Lion

From: Arthur Roberts <audie.uga.edu>
Date: Sun, 20 May 2012 19:12:33 -0400

Hi, all.

Thanks for the info. I appreciate your help. However, I still get the
following errors, when I try to install on Lion Mac OSX:

bintraj.f90:558.18:

   call checkerror(nf90_put_var(ncid, var_id, buf(:,:), &
                   1
Error: Generic function 'nf90_put_var' at (1) is not consistent with a
specific intrinsic interface
bintraj.f90:450.18:

   call checkerror(nf90_put_var(mdcrd_ncid, coord_var_id, buf(:,:), &
                   1
Error: Generic function 'nf90_put_var' at (1) is not consistent with a
specific intrinsic interface
bintraj.f90:220.22:

       call checkerror(nf90_put_att(mdcrd_ncid, mdcrd_veloc_var_id, &
                       1
Error: Generic function 'nf90_put_att' at (1) is not consistent with a
specific intrinsic interface
bintraj.f90:316.20:

     call checkerror(nf90_put_att(mdvel_ncid, mdvel_veloc_var_id, &
                     1
Error: Generic function 'nf90_put_att' at (1) is not consistent with a
specific intrinsic interface
make[2]: *** [bintraj.o] Error 1
make[1]: *** [install] Error 2
make: *** [serial] Error 2

Much appreciated,
Audie


On 5/20/12 7:52 AM, case wrote:
> On Sat, May 19, 2012, Arthur Roberts wrote:
>> However, I get the following error:
>>
>> gfortran -c -O3 -mtune=generic -ffree-form -o mbar.o _mbar.f
>> cpp -traditional -P -DBINTRAJ bintraj.f> _bintraj.f
>> gfortran -c -O3 -mtune=generic -ffree-form -o bintraj.o _bintraj.f
>> _bintraj.f:403.25:
>>
>> call checkerror(nf90_put_att(vel_ncid, VelocVarID,
>> "scale_factor",&
>> 1
>> Error: Generic function 'nf90_put_att' at (1) is not consistent with a
>> specific intrinsic interface
> There have been two separate reports about this on Lion. The full line
> in bintraj.F90 is
>
> call checkNCerror(nf90_put_att(vel_ncid, VelocVarID, "scale_factor",&
> 20.455), "define velocity scale_factor")
>
> I don't have Lion myself, but suggest putting quotes around "20.455" to see
> if that helps. (Lack of quotes seems to be the distinguishing feature of this
> call to nf90_put_att compared to all the others.
>
> (Similar instructions for earlier versions of Amber.)
>
> Of course, this will have to be tested for functionality as well.
>
> ....dac
>
> _______________________________________________
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> http://lists.ambermd.org/mailman/listinfo/amber
>
>


-- 
Dr. Arthur "Audie" Roberts, Ph.D.
University of Georgia
Department of Pharmaceutical and Biomedical Sciences
250 W. Green St.
Pharmacy South, Room 424
Athens, GA 30602
email: audie.uga.edu
alt: aroberts99163.yahoo.com
office: 706-542-7787
lab: 706-542-5979
fax: 706-542-5358
cell: 206-850-7468
skype=aroberts92122
For urgent matters, text me at 206-850-7468.
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Received on Sun May 20 2012 - 16:30:04 PDT
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