Dear David Case,
Following your suggestions ,I got the same information using gcc -v and
gfortran --v :
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
--infodir=/usr/share/info --enable-shared --enable-threads=posix
--enable-checking=release --with-system-zlib --enable-__cxa_atexit
--disable-libunwind-exceptions --enable-libgcj-multifile
--enable-languages=c,c++,objc,obj-c++,java,fortran,ada
--enable-java-awt=gtk --disable-dssi --enable-plugin
--with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic
--host=x86_64-redhat-linux
Thread model: posix
gcc version 4.1.2 20080704 (Red Hat 4.1.2-46)
I re-configured it using the -nofftw3 and can successfully installed the
serial and parallel version of amber 12.
Best regards
Shulin
On Wed, Apr 25, 2012 at 8:12 PM, David A Case <case.biomaps.rutgers.edu>wrote:
> On Wed, Apr 25, 2012, Shulin Zhuang wrote:
>
> > I use gfortran.
>
> It would still be very helpful if you could type "gfortran --v" and
> "gcc -v" and report what the result is.
>
> >
> > step 1: ./configure gnu this step is ok
> >
> > step 2:make install During this step lots of warning and
> error.
> > I just select several warnings and errors:
>
> Warnings are not important.
>
> > gfortran -DFFTW -DBINTRAJ *-c -O3 -ffree-form
> > *-I/home/hjkx/program/amber12//include
> > -I/home/hjkx/program/amber12//include *-o fftw3.o fftw3.F90*
> >
> > error： sententce (1) not defined in file fftw3.f03:1732
> >
> > included in * fftw3.F90*：10
> >
> > type(C_PTR), value :: output_file
>
> I suspect that your compiler does not support the ISO_C interface, but that
> somehow the configuration script thought that it did. This is why we
> need version numbers. It is also required that gcc and gfortran use the
> same
> version of the compilers.
>
> A workaround (depending on your needs) is to re-configure using the
> -nofftw3
> flag.
>
> ...dac
>
>
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>
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Received on Wed Apr 25 2012 - 17:30:12 PDT
